Skip to content

AutoDock Vina

AutoDock Vina is an open-source program for doing molecular docking.[1]

Installed Versions

AutoDock Vina 1.2.3 is installed on Picotte. Use the modulefile:

vina/intel/2020/1.2.3

N.B. this is distinct from VinaLC

Documentation

Please consult the official documentation.[2]

Python bindings

The official documentation shows how to use Anaconda[3] to have Python bindings.

Generally, Anaconda (or Mini Conda) is not well-suited for multi-user systems like Picotte. We recommend, instead, using Python virtual environments (venv) which provide similar capabilities to Conda environments. For an example, see the article Installing TensorFlow 2.11.0 using pip and venv.

See Also

References

[1] AutoDock Vina website

[2] AutoDock Vina Documentation

[3] AutoDock Vina Documentation - Installation - Python bindings