Available
- Abaqus
- ABySS
- ADAM
- AlphaFold_Databases
- AlphaFold2
- ANSYS_Fluent
- Anvi'o
- Apache_Spark
- Atomsk
- Augustus
- Autoconf
- AutoDock_Vina
- Bazel
- SAMtools
- Seqkit
- BEAGLE
- Bedtools
- Bioconductor
- BLAST_Databases
- Berkeley_Lab_CheckpointRestart
- Bowtie
- BWA
- BWA-MEM2
- Caffe
- CFM-ID
- GroopM
- CMAQ
- Docker
- Singularity
- COMSOL_Multiphysics
- CRISPR-related_Software
- Cytoscape
- DIAMOND
- EA-utils
- EnergyPlus
- Exonerate
- FastQC
- Foam-extend
- GEOS-Chem_Classic
- GEOS-Chem_ExtData
- GEOS-Chem_High_Performance
- Git
- GNU_Parallel
- GNU_Scientific_Library
- Code_Profilling
- Grinder
- GROMACS
- GroopM
- HDF5
- HPN-SSH
- SAMtools
- IDBA-UD
- Intel_oneAPI
- IQ-TREE
- Java
- Jellyfish
- Julia
- Jupyter
- JupyterLab
- Jupyter_Hub
- Jupyter_via_VS_Code
- Julia_in_Jupyter
- Stata_in_Jupyter
- R_in_Jupyter
- Kallisto
- TeX_Live
- LAMMPS
- LIBSVM
- Lighter
- LS-Dyna
- MAFFT
- Mathematica
- MATLAB
- MEGAHIT
- MetaBat2
- Minimap2
- MMseqs2
- NAMD
- NCBI_BLAST
- NCBI_SRA_Toolkit
- NetCDF
- NetLogo
- Nextflow
- Nf-core-mag
- NVIDIA_GPU_Cloud_Containers
- NGC_Deep_Learning_Example
- NVIDIA_CUDA_on_Picotte
- NVIDIA_CUDA_on_Proteus
- Grid_Engine_Quick_Start_Guide
- GPU_Jobs_on_Picotte
- GPU_Jobs_on_Proteus
- Grid_Engine_to_Slurm_Rosetta_Stone
- Parallel_Environments
- Octave
- Open_Babel
- OpenFOAM
- OpenMM
- OpenMP
- OpenSHMEM
- ORCA
- ParaView
- PBSuite
- Perl
- PETSc
- Phyluce
- PhymmBL
- PILER
- PILER-CR
- PROJ
- PyRAD
- Python
- Python_virtual_environments
- Anaconda
- Biopython
- FEniCS
- Gensim
- Keras
- Kmcuda
- MPI_for_Python
- PICRUSt
- Pypar
- Scikit-learn
- QIIME
- Quantum_Espresso
- R
- R_vs
- Racket
- Ray
- Rclone
- Restic
- Ruby
- Salmon
- SAS
- SCAT
- Schrodinger
- SeqLib
- SeqPrep
- Singularity
- Spack
- SPAdes
- STAR-CCM+
- Stata
- Strelka2
- Subread
- SuiteSparse
- URMAP
- TensorFlow
- Sample_TensorFlow_Datasets
- Trinity_for_RNA-Seq_De_novo_Assembly
- VDB
- Vcftools
- VinaLC
- VSEARCH
- Zlib
- Zstd