Compiling Treemix
Treemix is a method for inferring the patterns of population splits and mixtures in the history of a set of populations.[1]
Source Code♯
Downloads are at: https://bitbucket.org/nygcresearch/treemix/downloads/
Prerequisites♯
- Needs Boost >= 1.42 so the default system
Boost will not work.
- Use boost 1.57.0 via this modulefile:
boost/openmpi/gcc/64/1.57.0
Configure♯
Because the Boost is not in a standard location, the configure script must be told of the location:
./configure --prefix=/mnt/HA/groups/myrsrchGrp/something_here --with-boost=${BOOSTDIR}
The environment variable BOOSTDIR is defined by the modulefile.
Build♯
Just type:
make
make install