Compiling SortMeRNA
SortMeRNA is a program tool for filtering, mapping and OTU-picking NGS reads in metatranscriptomic and metagenomic data.[1]
Installed Version♯
SortMeRNA 2.1b is available on Proteus. Use the module file:
sortmerna/2.1b
Compiling SortMeRNA♯
Download♯
Either the source from the website, or clone the GitHub repository.
Configure♯
Decide where you want SortMeRNA to be installed. A typical location
would be "/mnt/HA/groups/myrsrchGrp/". Use this as the installation
prefix:
./configure --prefix=/mnt/HA/groups/myrsrchGrp
Build♯
Build with "make":
make -j 4 >& Make.out &
Install♯
Install with "make":
make install >& Make.install.out &