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Salmon

Salmon is a tool for quantifying the expression of transcripts using RNA-seq data. Salmon uses new algorithms (specifically, coupling the concept of quasi-mapping with a two-phase inference procedure) to provide accurate expression estimates very quickly (i.e. wicked-fast) and while using little memory.[1][2]

Installed Version

Salmon 1.9.0 is installed on Picotte. Use the modulefile:

salmon/1.9.0

References

[1] Salmon website

[2] Salmon GitHub repository