IDBA-UD
IDBA-UD is an iterative De Bruijn Graph De Novo Assembler for Short Reads Sequencing data with Highly Uneven Sequencing Depth.[1][2]
Installed Version
IDBA-UD 1.1.3 is installed on Proteus. This is a unified bundle containing IDBA, IDBA-UD, IDBA-Hybrid, and IDBA-Tran. Use the modulefile:
idba/1.1.3
The command is idba_hybrid.
Citing
Please cite according to IDBA-UD authors' instructions.[3]
References
[1] IDBA-UD website
[3]